AlphaGenome

• Purpose: Takes DNA sequences up to 1 million bp in length as inputPredicts genomic functions at single-base resolution, including gene expression, splicing, chromatin, and 3D contacts

• Use Case: Particularly focused on predicting the effects of regulatory variants

Atlas browser

AlphaGenome

AlphaGenome – Access Google DeepMind’s unifying genomics model for deciphering DNA function.

https://deepmind.google.com/science/alphagenome/atlas

AlphaGenome Atlas: Molecular predictions for 9 Billion human DNA variants

Explore AlphaGenome Atlas, a catalogue predicting the molecular effects and AVI scores for 9 billion single-nucleotide variants across the human genome.

https://deepmind.google/blog/alphagenome-atlas-a-predictive-map-of-every-possible-dna-letter-change-in-the-human-genome/

API code

AlphaGenome: AI for better understanding the genome

Introducing a new, unifying DNA sequence model that advances regulatory variant-effect prediction and promises to shed new light on genome function — now available via API.

https://deepmind.google/discover/blog/alphagenome-ai-for-better-understanding-the-genome/

Documentation

Exploring the genome with AlphaGenome — AlphaGenome

This API provides access to AlphaGenome, Google DeepMind’s unifying model for deciphering the regulatory code within DNA sequences.

https://www.alphagenomedocs.com/

Paper

AlphaGenome - a google Collection

Collection of AlphaGenome models.

https://huggingface.co/collections/google/alphagenome